Talks
Openscapes: Better Science for Future Us. Supporting NASA Earth science research teams’ migration to the cloud - August 12, 2021: LP DAAC User Working Group (20 minutes)
Better Science for Future Us — July 12, 2021: Plenary at the inaugural Society for Open, Reliable, and Transparent Ecology and Evolutionary Biology SORTEE conference (30 minutes) (video)
Better Science for Future Us - June 30, 2021: PANGEO Showcase (15 minutes) (PANGEO Discourse, Zenodo)
Open science as a movement and the art of Openscapes — June 5, 2021: Keynote with Dr. Allison Horst at CascadiaR Conference (20 minutes)
Learning to code with open science communities — June 4, 2021: Nature Webcast (video) (10 minutes)
Openscapes for better science in less time, together — April 6, 2021: CZI Seed Networks Computational Biology Meeting (30 minutes)
NASA DAACs Openscapes Framework — March 25, 2021: NASA ESDS-ESDIS-DAACs-IMPACT Meeting (15 minutes)
How you can do better science in less time — March 5, 2021: University of South Florida – College of Marine Science Seminar Series with Dr. Marcus Beck: Open science lessons from Tampa Bay (20 minutes each) (video)
Open practices for better science in less time — February 24, 2021: Open Science Community of Practice, Environment and Climate Change Canada (40 minutes) (video)
NASA DAACs Openscapes Framework — February 10, 2021: NASA’s Earth Science Data System Working Groups (ESDSWG) (5 minutes)
Openscapes — December 16, 2020 Invest in Open’s Joint Roadmap for Open Science Tools (JROST) Conference (5 minutes)
Audience building for open source projects - Workshop at Chan Zuckerberg Initiative Essential Open Source Software for Science Meeting - December 8, 2020
Normalizing talking about data - CSCCE Data Science Special Interest Group Discussion - November 23, 2020
R and teamwork for better science in less time - NOAA Northwest Fisheries Science Center - November 19, 2020
How to empower researchers with open science through meeting analytical needs and supporting people - National Academies of Sciences, Engineering, and Medicine (NASEM) Roundtable on Aligning Incentives for Open Science - November 5, 2020
Operationalizing better science in less time - Integrating Open Science Tools into National Estuaries Programs Workflows Workshop - October 29, 2020
Entryways to open data science and the power of welcome — Keynote at the Earth Science Information Partners annual conference – July 16, 2020 (remote)
R and teamwork for better science in less time — German Centre for Integrative Biodiversity Research (iDiv), Leipzig, Germany. April 21, 2020 (remote)
Supercharging research with open data science and teamwork — Keynote at Open Science Conference, Berlin, Germany March 11, 2020 (remote)
R and teamwork for better science in less time — UMass Dartmouth’s School for Marine Science & Technology (SMAST), New Bedford, Massachusetts February 25, 2020
R and teamwork for better science in less time — Southern California Coastal Water Research Project (SCCWRP), Costa Mesa, California February 7, 2020 (video)
R for Excel Users — Workshop at RStudio::conf(2020), San Francisco, California 2020-01-27
R for better science in less time — headline talk at Southern California R Users All Hands Meetup, Los Angeles, California 2019-11-23
R for better science in less time: Lessons from the Ocean Health Index and Openscapes - invited talk at the School of Aquatic and Fisheries Sciences, University of Washington, Seattle, Washington 2019-11-21
R and friends for better science in less time in big (and small) team collaborations - invited talk at the eScience Institute, Seattle, Washington 2019-11-19
Building communities of practice around environmental open data science - talk at FORCE11 Conference, Edinburgh, Scotland 2019-10-16)
Better science in less time: Lessons from the Ocean Health Index and Openscapes - invited talk at the Tampa Bay Estuary Program Open Science Workshop, St Petersburg, Florida (remote) 2019-09-05
R for better science in less time — opening keynote talk at useR! conference, Toulouse, France 2019-07-10 (video, starts ~46:30)
Building communities of practice around environmental open data science — talk at csv,conf,v4 in Portland, Oregon 2019-05-08 (slides on Zenodo)
How the Ocean Health Index enables better science in less time — invited seminar at the Bren School of Environmental Science and Management, University of California at Santa Barbara 2019-04-15
Streamlined workflows in R — talk at RLadies Santa Barbara 2019-03-14
Transforming how we approach marine science for management — invited guest lecture at University of California at Santa Barbara Conservation Ecology course 2019-03-07
Building communities of practice around environmental open data science — invited talk at the Palo Alto University Rotary Club Meeting 2019-02-08
My Fellowship with Mozilla: Building communities of practice around environmental open data science — seminar at the National Center for Ecological Analysis and Synthesis 2018-11-07
The power of open science: experience from the Ocean Health Index — invited seminar at the Woods Hole Oceanographic Institution 2018-10-24
Software Carpentry — 2-day workshop at the Woods Hole Oceanographic Institution (WHOI) 2018-10-22 (Intro to data science book)
What is the Ocean Health Index Toolbox and how can it help you? — invited webinar at the Helmholz Open Science Institute 2018-07-12
The power of open science: experience from the Ocean Health Index — invited seminar at the National University of Samoa 2018-05-22
The power of open science: experience from the Ocean Health Index — invited seminar at Moss Landing Marine Laboratories, California, USA 2018-04-05
Data integration and team science — 4 day workshop at NCEAS, California, USA 2018-03-12
The power of open science: experience from the Ocean Health Index — invited keynote talk at the Royal Belgian Institute of Natural Sciences, Brussels 2018-02-27
Better science in less time using open data science tools — invited seminar at Cal State University Monterey Bay 2017-12-04
Software Carpentry — 2-day workshop at the Monterey Bay Aquarium Research Institute (MBARI) 2017-11-30 (Intro to data science book)
Reproducible Research: Better science in less time — invited webinar for DataONE 2017-10-10
Better science in less time using data science tools: How open data science tools have improved our science — invited talk at Cal Poly 2017-09-29
Data Carpentry: Open and Reproducible Ecology — 2-day workshop at the University of California Merced 2017-08-17
Better science in less time — website to accompany our Nature Ecology & Evolution publication 2017-05-23
Better science in less time — open data science for marine science and management — talk at NCEAS Roundtable 2017-05-24 [video]
Transforming how we approach marine science for management — talk at EBM Tools Network Webinar 2017-05-02 [video]
Making free websites with RStudio’s R Markdown — tutorial at NCEAS 2016-12-14
Better science in less time using data science tools — talk at WSN Conference 2016-11-15
Being a marine data scientist — invited talk at Stanford’s Hopkins Marine Station 2016-10-21 [video]
Resources for R and Data Science — blog 2016-09-29
Software Carpentry: Reproducible Science with RStudio and GitHub — 2-day workshop at Oxford University 2016-07-12
Software Carpentry — 2-day workshop at UC Santa Barbara 2016-04-15
“Open science” and why it matters — blog 2016-04-03
Introduction to RStudio Awesomeness — blog 2016-02-14
The Ocean Health Index and Shiny — talk at RStudio’s Shiny Conference 2016-01-30
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Publications
Google Scholar
JS Stewart Lowndes 2019. Scientific American. Open software means kinder science.
JS Stewart Lowndes et al. 2019. Nature Career Column. Supercharge your research: a ten-week plan for open data science.
BS Halpern et al. 2019, Scientific Reports. Recent pace of change in human impact on the world’s ocean.
MJ Burgass et al. 2018, Regional Environmental Change. A pan-Arctic assessment of the status of marine social-ecological systems.
JS Stewart Lowndes et al. 2017. Nature Ecology & Evolution. Our path to better science in less time using open data science tools.
BS Halpern et al. 2017, PLOS ONE. Drivers and implications of change in global ocean health over the past 5 years.
RM Daigle et al. 2017, PLOS ONE. Incorporating public priorities in the Ocean Health Index: Canada as a case study.
SK Katona et al. 2017. OpenChannels. Navigating the seascape of ocean management: waypoints on the voyage toward sustainable use.
BS Halpern et al. 2016, Chapter 7.8: Ocean Health Index for the world’s large marine ecosystems. In: IOC-UNESCO and UNEP. Large Marine Ecosystems: Status and Trends. United Nations Environment Programme, Nairobi, pp. 239–249.
A Borja et al. 2016, Frontiers in Marine Science. Overview of Integrative Assessment of Marine Systems: The Ecosystem Approach in Practice.
JS Stewart Lowndes et al. 2015, PeerJ. Best practices for assessing ocean health in multiple contexts using tailorable frameworks.
BS Halpern et al. 2015, Nature communications. Spatial and temporal changes in cumulative human impacts on the world’s ocean.
BS Halpern et al. 2015, PloS One. Patterns and emerging trends in global ocean health.
JS Stewart et al. 2014, Global Change Biology. Combined climate- and prey-mediated range expansion of Humboldt squid (Dosidicus gigas), a large marine predator in the California Current System.
R Rosa et al. 2013, Nova Science Publishers. Advances in Squid Biology, Ecology and Fisheries.
JS Stewart et al. 2013, Deep Sea Research II. Behavioral ecology of Jumbo squid (Dosidicus gigas): in relation to oxygen minimum zones.
JS Stewart et al. 2013, Deep Sea Research II Onshore-offshore movement of jumbo squid (Dosidicus gigas) on the continental shelf.
RK O’Dor et al. 2013, Deep Sea Research II. Squid rocket science: how squid launch into air.
JC Field et al. 2013, Deep Sea Research II. Foraging ecology and movement patterns of the Humboldt squid in the California Current.
JS Stewart et al. 2012. Marine Ecology Progress Series Marine predator migration during range expansion: Humboldt squid (Dosidicus gigas) in the California Current System.
JS Stewart, 2012. PhD Dissertation, Stanford University. Humboldt squid in the northern California Current System.
WF Gilly et al. 2012, Journal of Experimental Biology. Locomotion and behavior of Humboldt squid, Dosidicus gigas, in relation to natural hypoxia in the Gulf of California, Mexico.
AC Iles et al. 2012, Global Change Biology.Climate driven trends and ecological implications of event-scale upwelling in the California Current System.
CB Woodson et al. 2011, Geophysical Research Letters. Observations of internal wave packets propagating along-shelf in northern Monterey Bay..
RK O’Dor et al. 2007. GLOBEC Report No. 24. Fin Flaps: key adaptation for habitat expansion in the squid, Dosidicus gigas?
JS Stewart and WF Gilly. 2005, Biological Bulletin. Piscivorous behavior of a temperate cone snail, Conus californicus.
Announcing Openscapes: Open Science is Better Science, 2019. Mozilla, Medium
Mozilla announces 25 new fellows in openness, science, and tech policy, 2018. Mozilla, Medium
A toolkit for data transparency takes shape, 2018. Jeffrey Perkel, Nature
.rprofile: Julia Stewart Lowndes, 2018. Sean Kross & Kelly O’Briant, rOpenSci blog
My digital toolbox: Julia Stewart Lowndes, 2017. Jeffrey Perkel, Nature
The Common Language of Conservation, 2017. Michelle Nijhuis, The Last Word On Nothing
Awash in Sea of Data, Ecologists Turn to Open Access Tools, 2017. John Rennie, Quanta Magazine
Ecologists Are Drowning in Sea of Data. These Tools Could Help, 2017. John Rennie, WIRED
Magical morphing jumbo squid are taking over the eastern Pacific, 2015. Michael Tennesen, New Scientist
Baja nota para la salud de los océanos, 2014. Aleszu Bajak, SciDevNet
The ten best ocean stories of 2012: year of the squid, 2012. Smithsonian Magazine
Humboldt squid’s impressive dives, 2012. Jonathan Amos, BBC
Squid can fly to save energy, 2012. Jessica Marshall, Nature News
Laid-back squid slow down with oxygen levels drop, 2012. Yfke Hager, PNAS
Hunt for the Giant Squid, 2011. National Geographic and Ammonite
Kraken, 2011. Wendy Williams, Abrams Image publishers
Alien Squid Invasion, 2011. National Geographic Channel Wild Case Files
Doing Battle with the Red Devils of the Pacific, 2011. Peter Aldhous, New Scientist
Graduate students take urban runoff by storm, Center for Ocean Solutions blog, 2011
What happened to the Humboldt squid? 2010. Jennifer Skene, KQED Quest
Squids-4-Kids in Washington DC, 2010. Lou Bergeron, Stanford News
Squids-4-Kids, 2010. Stanford Daily